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March 18, 2011 The modENCODE Consortium. We have published a series of papers on functional annotation of the D. melanogaster genome. See our contributions here.

February 1, 2010 We have redesigned the embryonic expression patterns website and are in the process of loading the Release 3 collection with data for ~7500 genes. While we are still testing and improving the new site, the original site will remain available.  See FAQ for details on the changes.

September 15, 2009 Illumina RNA-Seq data from 30 developmental time points of D. melanogaster has been submitted to the Short Read Archive at NCBI as part of the modENCODE project. The data set currently contains 2.2 billion single-end and paired reads and over 201 billion base pairs.

Metamorphosis: The Artistic Impressions of Pamela Lewis

Projects

• Genomic Sequencing
  
  • D. melanogaster Release 5 Genome
  • Drosophila Heterochromatin Genome Project
  • Natural Transposable Elements
  • SNP Map
  • Comparative Genomics
• Transcript Sequencing
  • EST Sequencing
  • Drosophila Gene Collection
• modENCODE
  • Data Coordinating Center
  • The Transcriptome
  • Chromosomal Proteins
• Gene Expression
  • Expression Patterns
    Systematic determination of patterns of gene expression in Drosophila embryogenesis by RNA in situ
    Expression Patterns: New Site (beta)
    Redesigned website with new data.
  • CRM Analysis
• Gene Disruption Project
  Insertion of single transposable elements to disrupt and manipulate Drosophila genes

Resources

• Universal Proteomics Resource
  Search for clones for expression and tissue culture
• Download
  Sequence data sets and annotations in fasta or xml format by http or ftp
• Materials
  Request genomic or cDNA clones, library filters or fly stocks
• Publications
  Browse or download BDGP papers
• Methods
  BDGP laboratory protocols and vector maps

Software Tools

• Analysis Tools
  Search sequences for CRMs, promoters, splice sites, and gene predictions
• Apollo
  Genome annotation viewer and editor

Search BDGP Site

• Go To FlyBase

About BDGP:  general overview, contact information, news archive, how to cite BDGP

The Berkeley Drosophila Genome Project (BDGP) is a consortium of the Drosophila Genome Center funded by the National Human Genome Research Institute and the National Institute of General Medical Sciences through its support of work in the Susan Celniker, Roger Hoskins, Suzanna Lewis and Gary Karpen laboratories.

Please send comments or questions about the web site to bdgp at fruitfly dot org
Last updated: Monday, 26-Sep-2011 14:59:41 PDT, Size: 5.9K